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植物病理学研究室

研究業績(Research achievement)

原著論文・著書

2019

  • Tomoki Nishioka, Malek Marian, Issei Kobayashi, Yuhko Kobayashi, Kyosuke Yamamoto, Hideyuki Tamaki, Haruhisa Suga and Masafumi Shimizu (2019) Microbial basis of Fusarium wilt suppression by Allium cultivation. Scientific Reports 9:1715 (doi.org/10.1038/s41598-018-37559-7)
  • Malek Marian, Akio Morita, Hiroyuki Koyama, Haruhisa Suga and Masafumi Shimizu (2019) Enhanced biocontrol of tomato bacterial wilt using the combined application of Mitsuaria sp. TWR114 and nonpathogenic Ralstonia sp. TCR112. Journal of General Plant Pathology 85: 1-13.
  • Haruhisa Suga, Mitsuhiro Arai, Emi Fukasawa, Keiichi Motohashi, Hiroyuki Nakagawa, Hideaki Tateishi, Shin-ichi Fuji, Masafumi Shimizu, Koji Kageyama, Mitsuro Hyakumachi (2019) Genetic differentiation associated with fumonisin and gibberellin production in Japanese Fusarium fujikuroi. Applied and Environmental Microbiology 85 Issue 1 e02414-18

2018

  • Malek Marian, Tomoki Nishioka, Hiroyuki Koyama, Haruhisa Suga, and Masafumi Shimizu (2018) Biocontrol potential of Ralstonia sp. TCR112 and Mitsuaria sp. TWR114 against tomato bacterial wilt. Applied Soil Ecology 128: 71-80.
  • Tomoki Nishioka, Chihiro Tanaka, Malek Marian1, Yasuhiro Igarashi, Haruhisa Suga, Masafumi Shimizu (2018) Role of Burkholderia-derived pyochelin in the Fusarium wilt suppression of Allium-cultivated soil. IOBC-WPRS Bulletin 133: 130-131.
  • Malek Marian, Tomoki Nishioka, Hiroyuki Koyama, Haruhisa Suga, Masafumi Shimizu (2018) Novel isolates of Ralstonia and Mitsuaria species
    as biocontrol agents for controlling tomato bacterial wilt. IOBC-WPRS Bulletin 133: 9-10.
  • Dandan Li, Naoya Oku, Atsumi Hasada, Masafumi Shimizu and Yasuhiro Igarashi (2018) Two new 2-alkylquinolones, inhibitory to the fish skin ulcer pathogen Tenacibaculum maritimum, produced by a rhizobacterium of the genus Burkholderia sp. Beilstein Journal of Organic Chemistry 14: 1446-1451.
  • 清水将文(2018)ネギ類の混植によるホウレンソウ萎凋病の抑制.植物防疫 72巻第7号:418-421.
  • 清水将文(2018)植物内生放線菌による植物病害の生物防除.特集/微生物の農業利用、アグリバイオ 第2巻第2号:22-25.

2017

  • 清水将文(2017)植物生育促進微生物の働き.食と微生物の事典(北本勝ひこ他編)、朝倉書店、pp. 402-403.
  • 五十嵐千佳、浅野雄二、西岡友樹、須賀晴久、百町満朗、清水将文.ネギ類の混植によるホウレンソウ萎凋病の抑制.日本植物病理学会報 83: 87-94.
  • Hassan N., Nakasuji S., Elsharkawy M.M., Naznin H.A., Kubota M., Ketta H. and Shimizu M. (2017) Biocontrol potential of an endophytic Streptomyces sp. strain MBCN152-1 against Alternaria brassicicola on cabbage plug seedlings. Microbes and Environments 32: 133-141.(2017年度Microbes and Environments誌論文賞選考委員会推薦優秀論文)

2016

  • Nishioka T, Elsharkawy MM, Suga H, Kageyama K, Hyakumachi M and Shimizu M. (2016) Development of Culture Medium for the Isolation of Flavobacterium and Chryseobacterium from Rhizosphere Soil. Microbes and Environments 31: 104-110.(2016年度Microbes and Environments誌論文賞選考委員会推薦優秀論文)
  • Fujimori, N., Enoki, S., Suzuki, A., Naznin, H.A., Shimizu, M. and Suzuki, S. (2016) Grape apoplasmic B-1,3-glucanase confers fungal disease resisitance inArabidopsis. Scientia Horticulturae 200:105-110.
  • Suga, H., Kageyama, K., Shimizu, M. and Hyakumachi, M.(2017)A natural mutation involving both pathogenicity and perithecium formation in the Fusarium graminearum species complex. G3: Genes Genomes Genetics 6: 3883-3892
  • 清水将文(2016)ヨーロッパにおける微生物農薬開発研究の現状.バイオコントロール研究会レポート.14:11-18
  • 澤木克亘,佐伯裕作,清水将文,小林佑理子,小山博之(2016) Penicillium pinophilum接種によるシロイヌナズナの病害抵抗誘導性の評価. 無菌生物 46: 75-78

2015

  • Mohsen Mohamed Elsharkawy, Mai Nakatani, Mitsuyoshi Nishimura, Tatsuyuki Arakawa, Masafumi Shimizu and Mitsuro Hyakumachi. (2015) Suppression of rice blast, cabbage black leaf spot and tomato bacterial wilt diseases by Meyerozyma guilliermondii TA-2 and the nature of protection. Acta Agriculturae Scandinavica, Section B -- Soil & Plant Science 65:629-636.
  • Mohsen Mohamed Elsharkawy, Tatsuya Hase, Yusuke Yagi, Masafumi Shimizu and Mitsuro
    Hyakumachi (2015) Induction of systemic resistance against Fusarium crown and root rot disease by blast processing. Journal of Plant Interactions (DOI: http://dx.doi.or/10.1080/17429145.2015.1066038)
  • Elsharkawy, M.M., Nakatani, M., Nishimura, M., Arakawa, T., Shimizu, M. and Hyakumachi, M. (2015) Control of tomato bacterial wilt and root-knot diseases by Bacillus thuringiensis CR-371 and Streptomyces avermectinius NBRC14893. Acta Agriculturae Scandinavica, Section B -- Soil & Plant Science (DOI:10.1080/09064710.2015.1031819)
  • Nishioka, T., Suzuki, Y., Suga, H., Kobayashi, I., Kobayashi, Y., Hyakumachi, M. and Shimizu, M. (2016) Metagenomic analysis of bacterial flora in rhizospheres of Allium plants and suppressive activity of Pseudomonas isolates against Fusarium wilt of cucumber. IOBC-WPRS Bull. 115: 107-111

2014

  • Mohsen Mohamed Elsharkawy, Tatsuya Hase, Masafumi Shimizu and Mitsuro Hyakumachi (2014) Suppressive effects of a polymer sodium silicate
    solution on powdery mildew and root rot diseases of miniature rose. African Journal of Biotechnology 14: 2917-2927.
  • Marian, K., Ogawa, K., Yoshikawa, Y., Takasaki, S., Usami, A., Shimizu, M., Miyazawa, M and Hyakumachi, M. (2014) Agroecosystem development of industrial waste - Suppressive effects of beer yeast cell wall extract on plant diseases. Current Environmental Engineering 1: 207-211.
  • Khedr, A.A., Mehiar, F., El-Kady, S.M., Gabr, M.A., Elsharkawy, M.M. and Shimizu, M. (2014) Serological characteristics of Erwinia carotovora isolated from potato fields in Egypt. Plant Pathol J 13: 246-256.
  • Hassan, N., Elsharkawy, M.M., Shimizu, M. and Hyakumachi M. (2014) Control of Root Rot and Wilt Diseases of Roselle under Field Conditions. Mycobiology 42:376-84.
  • Hassan, N., Shimizu, M. and Hyakumachi, M. (2014). Occurrence of root rot and vascular wilt diseases in roselle (Hibiscus sabdariffa L.) in upper Egypt. Mycobiology 42: 66-72. (doi:10.5941/MYCO.2014.42.1.00)
  • Suga, H., Kitajima, M., Nagumo, R., Tsukiboshi, T., Uegaki, R., Nakajima, T., Kushiro, M., Nakagawa, H., Shimizu, M., Kageyama, K. and Hyakumachi, M. (2014). A single nucleotide polymorphism in the translation elongation factor 1α gene correlates with the ability to produce fumonisin in Japanese Fusarium fujikuroi. Fungal Biol (in press) doi:10.1016/j.funbio.2014.02.005
  • Hossain, M.M., Sultana, F., Miyazawa, M. and Hyakumachi, M. (2014). The plant growth-promoting fungus Penicillium spp. GP15-1 enhances growth and confers protection against damping-off and anthracnose in the cucumber. J Oleo Sci ( in press).
  • Hyakumachi, M., Mondal, S.N., Elsharkawy, M.M. and Hassan, N. (2014). Carbon loss by sclerotia of Sclerotium rolfsii under the influence of soil pH, temperature and matric potential and its effect on sclerotial germination and virulence. Appl Soil Ecol 77,34-41.
  • Elsharkawy, M.M., Hassan, N., Villajuan-Abgona, R. and Hyakumachi, M. (2014). Mechanism of Biological control of Rhizoctonia damping-off of cucumber by a non-pathogenic isolate of binucleate Rhizoctonia. Afric J Biotech 13,640-650.
  • Elsharkawy, M.M., Hassan, N., Ali, M., Mondal, S.N. and Hyakumachi, M. (2014). Effect of zoysiagrass rhizosphere fungal isolates on disease suppression and growth promotion of rice seedlings. Acta Agri Scand, Sect B (in press) doi:10.1080/09064710.2014.888470.
  • Naznin, H.A., Kiyohara, D., Kimura, M., Miyazawa, M., Shimizu, M., and Hyakumachi, M. (2014). Systemic resistance induced by volatile organic compounds emitted by plant growth-promoting fungi in Arabidopsis thaliana. PLoS ONE (in press). Doi:10.1371/journal.pone.0086882
  • Takahashi, H., Nakaho, K., Ishihara, T., Ando, S., Wada, T., Kanayama, Y., Asano, S., Yoshida, S., Tsushima, S., and Hyakumachi, M. (2014). Transcriptional profile of tomato roots exhibiting Bacillus thuringiensis-induced resistance to Ralstonia solanacearum. Plant Cell Rep (in press). doi:10.1007/s00299-013-1515-1.
  • Hieno, A., Naznin, H.A., Hyakumachi, M., Sakurai, T., Tokizawa, M., Koyama, H., Sato, N., Nishiyama, T., Hasebe, M., Zimmer, A.D., Lang, D., Reski, R., Rensing, S.A., Obokata, J., and Yamamoto, Y.Y. (2014). ppdb: plant promoter database version 3.0. Nucleic Acids Res D1188-1192. doi:10.1093/nar/gkt1027
  • Saldajeno, M.G.S., Naznin, H.A., Elsharkawy, M.M., Shimizu, M. and Hyakumachi, M. (2014). Enhanced resistance of plants to disease using Trichoderma spp. In Biotechnology and Biology of Trichoderma. (Eds. Gupta, V.K., et al.) . Elsevier, Amsterdam. pp.477-493.

2013

  • Elsharkawy, M.M., Shimizu, M., Takahashi, H., Ozaki, K., and Hyakumachi, M.(2013). Induction of systemic resistance against Cucumber mosaic virus in Arabidopsis thaliana by Trichoderma asperellum SKT-1. Plant Pathol J 29, 193-200. doi:10.5423/PPJ.SI.07.2012.0117.
  • Hieno, A., Naznin, H.A., Sawaki, K., Koyama, H., Sakai, Y., Ishino, H., Hyakumachi, M., and Yamamoto, Y.Y. (2013a). Analysis of environmental stress in plants with the aid of marker genes for H2O2 responses. Methods Enzymol 527, 221-237. doi:10.1016/B978-0-12-405882-8.00012-X.
  • Hyakumachi, M. (2013). Research on biological control of plant diseases: present state and perspectives. J Gen Plant Pathol 79, 435-440. doi:10.1007/s10327-013-0484-0.
  • 百町満朗. (2013). 生物防除研究の現状と展望. Jpn J Phytopathol 79, 123-127
  • Hyakumachi, M., Nishimura, M., Arakawa, T., Asano, S., Yoshida, S., Tsushima, S., and Takahashi, H. (2013). Bacillus thuringiensis suppresses bacterial wilt disease caused by Ralstonia solanacearum with systemic induction of defense-related gene expression in tomato. Microbes Environ 28, 128-134. doi:10.1264/jsme2.ME12162.
  • Kojima, H., Hossain, M.M., Kubota, M., and Hyakumachi, M. (2013). Involvement of the salicylic acid signaling pathway in the systemic resistance induced in Arabidopsis by plant growth-promoting fungus Fusarium equiseti GF19-1. J Oleo Sci 62, 415-426. doi:10.5650/jos.62.415.
  • Naznin, H.A., Kimura, M., Miyazawa, M., and Hyakumachi, M. (2013). Analysis of volatile organic compounds emitted by plant growth-promoting fungus Phoma sp. GS8-3 for growth promotion effects on tobacco. Microbes Environ 28, 42-49. doi:10.1264/jsme2.ME12085.
  • Qu, P., Saldajeno, M.G., and Hyakumachi, M. (2013). Mechanism of the generation of new somatic compatibility groups within Thanatephorus cucumeris (Rhizoctonia solani). Microbes Environ 28, 325-335. doi:10.1264/jsme2.ME12214.
  • Shimizu, K., Hossain, M.M., Kato, K., Kubota, M., and Hyakumachi, M. (2013). Induction of defense responses in cucumber plants by using the cell-free filtrate of the plant growth-promoting fungus Penicillium simplicissimum GP17-2. J Oleo Sci 62, 613-621. doi:0.5650/jos.62.613.
  • Suga, H., Hirayama, Y., Morishima, M., Suzuki, T., Kageyama, K., and Hyakumachi, M. (2013). Development of PCR primers to identify Fusarium oxysporum f. sp. fragariae. Plant Dis 97, 619-625. doi:10.1094/PDIS-07-12-0663-RE.
  • 清水将文(2013)第20章 各種微生物を用いた生物防除 20-2 放線菌,土壌微生物実験法 第3版(日本土壌微生物学会編),養賢堂,pp.225-229.
  • 百町満朗 (2013). 植物生育促進菌類.「菌類の事典」(日本菌学会編),朝倉書店,東京.pp.317-318.
  • Saldajeno, M.G.S., Elsharkawy, M.M., Chandanie, W.A., Ito, M., Shimizu, M. and Hyakumachi, M. (2013). Enhanced resistance due to the simultaneous application of plant growth-promoting fungi (PGPF) and arbuscular mycorrhizal fungus (AMF) in cucumber. In: Induced resistance in plants against insects and diseases. IOBC-WPRS Bulletin. 89:161-164.
  • Naznin, H.A., Kiyohara, D., Kimura, M., Miyazawa, M., Shimizu, M. and Hyakumachi, M. (2013). Systemic resistance induced by volatile substances produced by PGPF in Arabidopsis plants. In: Induced resistance in plants against insects and diseases. IOBC-WPRS Bulletin. 89:141-144.
  • Yoshida, S., Takahashi, H., Nakaho, K., Ishihara, T., Ando, S., Kanayama, Y., Tsushima, S. and Hyakumachi, M. (2013). Transcriptional profile of tomato roots exhibiting Bacillus thuringiensis-induced resistance to Ralstonia solanacearum. In : Induced resistance in plants against insects and diseases. IOBC-WPRS Bulletin. 89:73-77.
  • Yoshioka, Y., Naznin, H.A., Hieno, A., Shimizu, M., Hyakumachi, M. and Yamamoto, Y.Y. (2013). Prediction of transcriptional regulatory elements for systemic resistance induced by a plant growth promoting fungus Penicillium simplicissimum GP17-2 based on microarray data. In: IOBC-WPRS Bulletin. 86:313-317.
  • Shimizu, M., Hyakumachi, M., Kubota, M. and Kuroda, K. (2013). Biocontrol of Alternaria brassicola on cabbage seedlings and Glomerella cingulata on strawberry seedlings by endophytic Streptomyces spp. In: IOBC-WPRS Bulletin. 86:213-218.
  • Suzuki, Y., Shimizu, M. and Hyakumachi, M. (2013). Population of antagonistic actinomyces and bacteria against Fusarium oxysporum in the rhizosphere of cucumber and Welsh onion. In: IOBC-WPRS Bulletin. 86:187-188.
  • Elsharkawy, M.M., Hossain, M.M., Shimizu, M. and Hyakumachi, M. (2013). Induction of systemic resistance against Cucumber mosaic virus and bacterial speck pathogen by Penicillium simplicissimum GP17-2 in Arabidopsis and tobacco. In: IOBC-WPRS Bulletin. 86:177-184.t insects and diseases. IOBC-WPRS Bulletin. 89:161-164.

学会発表

2015

  • 日本植物病理学会大会(東京)で発表
  • 日本土壌微生物学会平成27年度大会(つくば)で発表
  • 共生微生物利用の未来(富山)で招待講演

2014

  • IOBC(国際生物防除学会、スウェーデン)で発表
  • 日本植物病理学会大会(北海道)で発表
  • 日本植物病理学会関西部会(富山)で発表

2013

  • IOBC(国際生物防除学会、フランス)で3題発表

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